Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKFGFLSVLEEELDKHLQYDFAMDWDKKNHTVEVTFILE-----AQNSSAIETVDDQGETSSEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY |
2KVO Chain:A ((1-120)) | MAEIQFSKGVAETVVPEVRLSKSKNGQSGMAKFYFLEPTILAKESTDDITGMYLIDDEGEIITREVKGKFI-------NGRPTAIEATVILNSQPEWDRFMRFMERYGAE----------------------------------NGLGFSKSELEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19450 for 719 contacts (27.1/contact) +
2D Compatibility (PS) -11689 + (NN) 2827 + (LL) 2600
1D Compatibility (HY) 1200 + (ID) 800
Total energy: 13588.0 ( 18.90 by residue)
QMean score : 0.198
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