Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MPEKMTNSENKRSKGFRMPGAFTILFILTIFSVLATWWIPAGSYSKLQFDTESSKLVVTDPNGKTVHVPATQTQLDKMNVKIKIKEFTSGAISKPVSVPNTYKRLKQNPAGIGSVTTSMVNGTIEAVDIMVFIMVLGGMIGVVRKSGAFESGLLALTKKTKGREFLLIFLVSLLMVLGGTLCGIEEE--AVAFYPILVPIFLAMGYDSIICVGAIFLASSVGTSFSTINPFSSVIA--SNAAGISFTEGLSWRTAGCIAGAIFVVVYLHWYAKKIKANPEFSYSYEDRVEFNAKWGMTTNHTPSLFTIRQKIILSLFVISFPLMVWGVMSQGWWFPTMASSFLAITIIIMFLTATGANGIGERDVVDEFVNGASSLVGVSLIIGLARGINIILSQGYISDTMLYTASKLASHVSGSVFIIVMMFIYFVLGFVVPSSSGLAVLSMPILAPLADTVGIPRSVVVMAYQFGQYAMLFLAPTGLVMATLQMLDMKYSHWLKFVWPVVLFLLIFGGGLLVLQVLIL |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQD-TSIKPFEITF-------------SETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSW-LKYWAEEYPFAERQKFL---NQYPHFKTNIQGLNIHFMRITPKVPKGVEI-VPLLLLHGWPGSVR---EFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGD-WGALIGSAMATFFP-KEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPEL---ANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFST---------WTNPDLRSK---------------EDG----------------------------GLSYRWTKDQLIDNLMLYWS------TKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHELAYQPPCILKMKYPKLVNASVIEDG-------------GHFLAFELPEIFAKDVLKA-IGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -377347 for 3456 contacts (-109.2/contact) +
2D Compatibility (PS) -42503 + (NN) 4275 + (LL) 9224
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -422751.0 ( -122.32 by residue)
QMean score : 0.183
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