Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKD-QTYFLSQLSQEQLQKTLFPLGHLQKPEVRRIAEEAGLATAKKKDSTGICFIGEKNFKDFLGQYLPAQPGRMMTVDGRDMGEHAGLMYYTIGQRGGLGIGGQHGGDNKPWFVVGKDLSKNILYVGQGFYHDSLMSTSLTASEIHFTRDMPNEFKLECTAKFRYRQPDSKVTVYVKGNQARVVFDDLQRAITPGQAVVFYNEQECLGGGMIDQAYRDDKICQYI |
| 3VRH Chain:A ((45-249)) | ---TKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISG------YSEKSEEYAKKQCKLIGAPLHIVRIKEILGYG-----IGEVK--TRRPPCSYCGLT-KRYIMNKFAYDNGFDAIATGHNLDDEASF-LLNNILHWNTEYLAKGGPILP--QQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPY----T-TLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFEPKECKICRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62503 for 1538 contacts (-40.6/contact) +
2D Compatibility (PS) -21427 + (NN) -4566 + (LL) 5372
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -92924.0 ( -60.42 by residue)
QMean score : 0.507
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