Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFS-------KIETIELADEKTP--------DKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQLPSESFSHLID--QKMISGYSTITFVIGGSLGLSQKVKKRADYLMSFGLLTLPHQLMKLVLMEQIYRAFMIRQGTPYHK----------
1T0I Chain:A ((1-185))
MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRLYHEWHGK-PALVVSYGGHGGSKCNDQLQEVLHGLKMNVIGGVAVKIPVGTIPLPEDIVPQLSVHNEEILQLLASCI
General information:
TITO was launched using:
RESULT:
Template:
1T0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60307 for 1206 contacts (-50.0/contact) +
2D Compatibility (PS) -16548 + (NN) -839 + (LL) -28
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -82922.0 ( -68.76 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1T0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0I-query.scw
PDB file :
Tito_Scwrl_1T0I.pdb
: