Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQRFFHFLVWSLT--SSATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVELTEKYAFLSSHPKKSKELSMSLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK----------------------------------------------------------------------------- |
| 4XA2 Chain:A ((1-490)) | MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAAS----PNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIP-----------QMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAAYQNYIAKSQVSTGLA-DITAGKTNAETKLAEGLTAALTDVEALGLQKSTNACSTITTSIGTNGASNITCTLKGTSQINSKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGASGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10362 for 1045 contacts (-9.9/contact) +
2D Compatibility (PS) -19306 + (NN) 503 + (LL) 1620
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -29045.0 ( -27.79 by residue)
QMean score : 0.122
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