Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEENKEKAIQLA-GQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEILGELMKKLEQVNPDDLQSKKKGFLARMFGRVSSSLQEVLSKYQKTSVQIDRISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQITIQSAPQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLLRQRNAVDAQQKVSDTTNELLLKNAELLKTNTIETARANERGLVDIDTLKKVQESLISTLEETLTIQEEGRIKRRQAEEELMMMEGDLKQKLITIKER |
4CIJ Chain:A ((1-267)) | MSGLKPCVDWLQVTFKT--------GQDSVKKCVEKLEKVFEILGLNEAEFLPLKNGKYGYK--QGVAFQGNPVLAVYYDGADDM---------GIHVEMTGQGCRLFELHTSIN--------WYELFYRLVY-------EYE---VNITRLDVAVDDFKGYF-----KINTLVKKLKD-----------DEVTSRFKKARHIENIVIEGG----------------------ETIGHTLYFGAP---SSDIQVRFYEKNVQMGMD---------IDVW-NRTEIQLR---DDRAHVVAQIIADDVLPLGEIVAGLLRNY------------IQFRTRKATDKN----------------KKRWPLARFWLNFLGDVQPLRIAKQM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40229 for 2030 contacts (19.8/contact) +
2D Compatibility (PS) -27588 + (NN) -3874 + (LL) 9808
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: 2575.0 ( 1.27 by residue)
QMean score : 0.207
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