Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNSRTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT-
2P61 Chain:A ((34-153))
--------------------------EFFDILEDVKEDHFEKLLEEAVEEVIDSGNELVRSPTPSNLKRYKNAIKEFLKLIEKKIYKLN-------SGRARLHLVVEEVNEKLMDLTEKIMKNEWQTINLAARIEEINGLILNLYRE
General information:
TITO was launched using:
RESULT:
Template:
2P61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33668 for 702 contacts (-48.0/contact) +
2D Compatibility (PS) -12177 + (NN) -7067 + (LL) 2216
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -59996.0 ( -85.46 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2P61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P61-query.scw
PDB file :
Tito_Scwrl_2P61.pdb
: