Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVTDVRLRRVNTDGRMRAIASITLDHEFVVHDIRVIDGNNGLFVAMPSKRTPDGEFRDITHPINSSTRGKIQDAVLNEYHRLGDTEALEFEEAGAS
1YUA Chain:? ((1-65))
--MNGEVAPPKEDPVPLPELPCEKSDAYFVLRD-----GAAGVFLAAN------------TFPKSRETRAPLVEELYRFRDRLP-------------
General information:
TITO was launched using:
RESULT:
Template:
1YUA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6331 for 386 contacts (-16.4/contact) +
2D Compatibility (PS) -6699 + (NN) 239 + (LL) 2132
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -13359.0 ( -34.61 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1YUA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YUA-query.scw
PDB file :
Tito_Scwrl_1YUA.pdb
: