Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEK----ETKNIRFFDDIYEKHDQFEAVYEEIADILFEAARREDVVYAVPGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIEG-----FQ--FVDAGTL------SADELELRHHLIICQVY---D---QMTASEVKLTLME--------KLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
| 3I4T Chain:A ((-1-252)) | --SMLYIIGLGLYDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAKLEEFYGKKVIIG----------------EADQILEPAKTKNVALLVVGDVYGAT-THSDIFVRCQKMGIEVKVIHNASIMNA-IGCSGLQLYRFGQTVSVCFWSEHWRPSSYYPKIKINRDNNMHTLVLLDIKVKEEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVACADQKIVYGKMKDLLHYDFGAPMHCLLIPA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106587 for 1489 contacts (-71.6/contact) +
2D Compatibility (PS) -22819 + (NN) -12532 + (LL) 22292
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -131996.0 ( -88.65 by residue)
QMean score : 0.465
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