Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNNSFYEDEHTTEKEWKDQIRYNILLEDLLTRDIDISNKELESFYNKNKELYQFDDSYRIRHIVVKDEE---------EAREVLKELKGG-SSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDKATVKTLWKEADVSWFYGEKSTK |
4G2P Chain:A ((6-109)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------VTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPD--IFDPAFRDALTKLHKGQIS-APVHSSFGWHLIELLDTRK----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22744 for 671 contacts (-33.9/contact) +
2D Compatibility (PS) -10672 + (NN) -6621 + (LL) 16044
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -28993.0 ( -43.21 by residue)
QMean score : 0.644
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