Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
4D8Z Chain:B ((34-294))------------------LNLNEKTLIMGILN------SDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGE---------SVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK------


General information:
TITO was launched using:
RESULT:

Template: 4D8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155064 for 2114 contacts (-73.4/contact) +
2D Compatibility (PS) -27781 + (NN) -19223 + (LL) 1724
1D Compatibility (HY) -30400 + (ID) 8200
Total energy: -238944.0 ( -113.03 by residue)
QMean score : 0.636

(partial model without unconserved sides chains):
PDB file : Tito_4D8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8Z-query.scw
PDB file : Tito_Scwrl_4D8Z.pdb: