Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQ--LGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGS-RYHRRPGSMGPVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKSK
3J7Y Chain:E ((95-305))
FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSK----GKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGHKNCLVKVKDSKLP-
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21751 for 1352 contacts (-16.1/contact) +
2D Compatibility (PS) -21703 + (NN) -5608 + (LL) -160
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -60122.0 ( -44.47 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: