Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYDL-TRGRITYRYK-----------------
1JT8 Chain:A ((20-102))
------NEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRI-WVREGDVVIVKPWEVQGDQKCDIIWRYTKTQVEWLKRKGYLDELL
General information:
TITO was launched using:
RESULT:
Template:
1JT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27656 for 435 contacts (-63.6/contact) +
2D Compatibility (PS) -6896 + (NN) 163 + (LL) 660
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -38129.0 ( -87.65 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1JT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT8-query.scw
PDB file :
Tito_Scwrl_1JT8.pdb
: