Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV
4KDR Chain:A ((54-197))-------------------------------------------------IAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGV-----------------------------------------KKFIKPAELLGWVDQTSLKERHITGL---------------------


General information:
TITO was launched using:
RESULT:

Template: 4KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75333 for 1122 contacts (-67.1/contact) +
2D Compatibility (PS) -16002 + (NN) -6255 + (LL) 8196
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -91044.0 ( -81.14 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4KDR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KDR-query.scw
PDB file : Tito_Scwrl_4KDR.pdb: