Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDK-T-YEVTVPTDKIAITGSVESMEDAKLLDVH--PQGAISFSGKFPDMFKDIT--DKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSH---IS-SNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVK-AAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL---AQGGTAWSKVRFLKAAAEKLTQN |
| 3GFV Chain:A ((14-297)) | -----------------------------------KEQITVKHQLDKNGTKVPKNPKKV-VVFDFGSLDTLDKLGLDDIVAGLPKQV--LPKYL-SKFKDDKYADVGSLKEPDFDKVAELDPDLIIISARQ-SESYKEFSKIAPTIYLGVDTAKYMESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEKLN--KNGLVIMANDGKISAFGPKSRYGL-IHDVFGVAPADQNIKASTHGQSVSYEYISKTNPDYLFVIDRGTAIG-ETSSTKQVVENDYVKNVNAVKNGHVIYLDSATWYLSGGGLESMTQM--IKEVKDGLEK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43791 for 2275 contacts (-19.2/contact) +
2D Compatibility (PS) -29914 + (NN) -20443 + (LL) 2992
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -104256.0 ( -45.83 by residue)
QMean score : 0.495
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