Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------MRKTIFAFLTGLMM--FGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDI-KLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGP-----ILEPEY-----------ASFVGLYPIPLKHGMTIGELASLFNKEFSI------DADLTVVKMKHWKRK-------MDFDDTRLPFVLPSPNMPTV-------ESTFVYPATGLIE----GTNISEGRGTTKPFELIGAPFIKSTELE------ETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFE----AVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIR--TKIENGTSVENIINSYEKTLQQFSKTRKKYLIY----------------------------
3JC6 Chain:E ((5-650))ISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEQSFRRDIYVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELNDLSKRKQRKKQIHEYEGVLEEYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIA-YAQVYNRLYPLLQDEVK--------RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISASEFVEALTALLEVGNSAQKLTNLRKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL


General information:
TITO was launched using:
RESULT:

Template: 3JC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7689 for 2637 contacts (2.9/contact) +
2D Compatibility (PS) -41565 + (NN) -7923 + (LL) 656
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -55893.0 ( -21.20 by residue)
QMean score : 0.124

(partial model without unconserved sides chains):
PDB file : Tito_3JC6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JC6-query.scw
PDB file : Tito_Scwrl_3JC6.pdb: