Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------MRKTIFAFLTGLMM--FGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDI-KLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGP-----ILEPEY-----------ASFVGLYPIPLKHGMTIGELASLFNKEFSI------DADLTVVKMKHWKRK-------MDFDDTRLPFVLPSPNMPTV-------ESTFVYPATGLIE----GTNISEGRGTTKPFELIGAPFIKSTELE------ETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFE----AVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIR--TKIENGTSVENIINSYEKTLQQFSKTRKKYLIY---------------------------- |
3JC6 Chain:E ((5-650)) | ISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEQSFRRDIYVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELNDLSKRKQRKKQIHEYEGVLEEYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIA-YAQVYNRLYPLLQDEVK--------RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISASEFVEALTALLEVGNSAQKLTNLRKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7689 for 2637 contacts (2.9/contact) +
2D Compatibility (PS) -41565 + (NN) -7923 + (LL) 656
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -55893.0 ( -21.20 by residue)
QMean score : 0.124
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