Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQKASP----KIPLMLSIDQEGGIVTRLG-EGTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAG----ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQTAS---IEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFVLMSLRNPYDAANFEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVTKPGNTLYPLGYGLNIKTGRPL |
4ZM6 Chain:A ((8-532)) | ------------------------------------------NLDKEIGQLLMCGFDGLEP------------TPGIIDLIENHNLGSIILFSRNIATPKQVQKLTHSLQQIARNAGHKRPLFIAVDQENGVVRRLGDSGTYLPGNMALGALGSSTAARNVAMAISKELLTLGMNWNLAPVLDVNNNPLNPVIGVRSYGQDPELVARMGLAQVEGYQRGKVATSIKHFPGHGDTATDSHLDVPVINKTLEELDKTELVPFKKALEAGGIACPTSVMVGHMLLPHFNK------------DVVSSIAPEIVRDLLRRRFGYKGVIITDCLEMDAVKETVGTPKGALMALQAGNDMAMISHTLAFQ------KDAFKVLYSALQEGQLDKDEIRQSLQRVAQLKDQFLNWDDVLQQ-------ADLKTMGSEAHATLSKELYDRVPTVVTNRKNTLPIRPAQTDKILFLAAHVP----EKEPFNSFHASLLKRHT---NLEYIIYNE--ETPDLSQKIQEADWVIIGTANAN--------------------LYPFQVRMVQQAQKLAKRLVVAAVMNPYDQMCFPQVDTYLVTYEYT--------PPAHEAAVRLIFGEIETRSRLPISIPNVDD-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195310 for 4752 contacts (-41.1/contact) +
2D Compatibility (PS) -54314 + (NN) -18720 + (LL) 7244
1D Compatibility (HY) -38800 + (ID) 8700
Total energy: -308600.0 ( -64.94 by residue)
QMean score : 0.501
|
|
|