Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHG----QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKK-MEVTIEH----GDVFIRDDGIGFDR-------------NESSEGLGLKIIEDTCRLLAITYELHTNDN-GTGFLFSKE |
| 4Q20 Chain:A ((535-755)) | --------------------------------------------------------------------------------------------------------------------------AEAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD--SERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERALKDAQLGGVTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRDRGGPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72532 for 1424 contacts (-50.9/contact) +
2D Compatibility (PS) -21518 + (NN) -11068 + (LL) 11872
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -101146.0 ( -71.03 by residue)
QMean score : 0.458
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