Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAY--------TGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIE-DRIKSGSGTFQFSGVAENKGNTSLSPS-------GSDSSVIKVDLTNQSG---IPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVK-AKIDYEYDVTKQF |
| 4LL1 Chain:A ((7-298)) | -IKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEV-----TRVK---------AVRILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGSVDYWVKAFLDRPSQPTQETKKNFEVVPDLMAPVSAKKEKKVSSMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTSSRIVVPKAAIVARHTYLA-------NGQTKVLTQKLSSVRGNHIISGTCASWR---GKSLRVQKINILRVEYSLLIYVSVPGSKKVILDLPLVIGS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7851 for 1826 contacts (4.3/contact) +
2D Compatibility (PS) -26625 + (NN) 3282 + (LL) 1308
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -23284.0 ( -12.75 by residue)
QMean score : 0.077
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