Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVTLGYLRESLSNHLENEVC-QRICKKMLAKRYANEEEFVKDLDDNEMSFLNHVLEKEIKYAQ-NEQDQKRAKELNEVYELLL
2DAT Chain:A ((59-114))
------------------PVDFKKIKERIRNHKYRSLGDLEKDVM--------LLCHNAQTFNLEGSQIYEDSIVLQSVFKS--
General information:
TITO was launched using:
RESULT:
Template:
2DAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 916 for 289 contacts (3.2/contact) +
2D Compatibility (PS) -5893 + (NN) -3219 + (LL) 1844
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -9152.0 ( -31.67 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2DAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DAT-query.scw
PDB file :
Tito_Scwrl_2DAT.pdb
: