Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTG--TRLTDMGLGWFVGFIKTEHGSYVFVTNVD----DSGTKAKNITVDILKKYGLITS
4WMC Chain:F ((17-241))---------------------------------------------SQGVVVLWNENKQQGFTNNLKRANQAFLPASTFKIPNSLIALDLGVVKDEHQVFKWDGQTRD-ATWNRDHNLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDYGNEDISGNVDSFWLDGGIRISATEQISFLRKLYHNKLHVSERSQRIVKQAMLTEANGDYIIRAKTGYSTRI-EPKIGWWVGWVELDDNVWFFAMNMDMPTSDGLGLRQAITKEVLKQEKII--


General information:
TITO was launched using:
RESULT:

Template: 4WMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1126 -124863 -110.89 -572.76
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain F : 0.75

3D Compatibility (PKB) : -110.89
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4WMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WMC-query.scw
PDB file : Tito_Scwrl_4WMC.pdb: