Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEQAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMKSKEIEDLNNAYETIKEIEKQGQL----------------------------TGMLEYYFYFFKGMYEFRRKELISAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTYFSMNYANRALKIFREYEEYAVQTVRCQFIVAGNLIDSLEYERALEQFLKSLEISKESNIEHLIAMSHMNIGICYDELKEYKKASQHLILALEIFEKSKHSFLTKTLFTLTYVEAKQQNYNVALIYFRKGRFIADKSDDKEYSAKFKILEGLFFSDG---E-TQLIKNAFSYLASRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIIDENQPDSIGSSDFK
4UI9 Chain:C ((231-551))------------------------IYTELQLIEEALQKYQNLIDVGFS------KSSYIVSQIAVAYHNIRDIDKALS-I-FNEL---RKQ-DPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLN------PRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRD-------YRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPN------DSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVE-----KMALVKLAKLHEQLTESEQAAQCYIKYIQDIYSC----ESTAFRYLAQYYFKCKLWDEASTCAQKCCAFN------DTREEGKALLRQILQLR----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1141 -120182 -105.33 -427.69
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain C : 0.59

3D Compatibility (PKB) : -105.33
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_4UI9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UI9-query.scw
PDB file : Tito_Scwrl_4UI9.pdb: