Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPLVGIIMGSTSDWETMKHACDILDELNVPYEKKVVSAHRTPDFMFEYAETARERGIKVIIAGAGGAAHLPGMTAAKTTLPVIGVPVQSKALNGMDSLLSIVQMPGGVPVATTSIGKAGAVNAGLLAAQILSAFDEDLARKLDERRENTKQTVLESSDQLV
3LP6 Chain:C ((7-146))-RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAG--NAGLLAVRMLGAANPQLRARI-------------------


General information:
TITO was launched using:
RESULT:

Template: 3LP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 790 -124981 -158.20 -892.72
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain C : 0.86

3D Compatibility (PKB) : -158.20
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_3LP6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LP6-query.scw
PDB file : Tito_Scwrl_3LP6.pdb: