Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSV--TAPGIQQ-GFIFQEHRLFPWLTVEQNIAADLNLKDPK---VKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLGNELAILKAKPGKIHKL-MPIHL-AYPRNRTTPDFQAIRQRVLSEFEKTEDLEYAEGSGI
2R6G Chain:A ((17-233))-------------------VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDQPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA--GRVAQVGKPLELYHYPADRFVAGF-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2R6G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1002 -131402 -131.14 -628.72
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -131.14
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_2R6G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R6G-query.scw
PDB file : Tito_Scwrl_2R6G.pdb: