Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIIIAIIAAVIVIAALITFNVRNASPGPEKQEATDRIAPPEEEKNEAHYPAEARAAEHTPSVVKNDSPKEKRDTMGDDIYRQALQKFKHSDEVHAEEEVTEESDKMQDRSYRDALLSMKNKKK
2M5E Chain:B ((1-26))------------------------------------------------------------------------------------------------KRKQEEVSAIVIQRAYRRYLLKQKVK--


General information:
TITO was launched using:
RESULT:

Template: 2M5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 7 834 119.14 32.08
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : 119.14
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.878

(partial model without unconserved sides chains):
PDB file : Tito_2M5E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2M5E-query.scw
PDB file : Tito_Scwrl_2M5E.pdb: