Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------MK----------------TCFLSIWRVVDPIYFFFSRLSLID----NDQKSVFRVRLTKYKGHHVVLSDGTHIRKNDVLVKIHLHNIKLI--RELQSIESAVRKGIIIYQKVYQSMPLLLDYINNHK-------------KSEKIKGIIG-------ITMLDKGVERLGFDVITPVNPFYRCFKKVSHV----PILYLT--SKPVSLRHLPNSSYLFISKE-----KLQKTYQKKD
1O9G Chain:A ((2-250))SAYRHAVERMDSSDLACGVVLHSAPGYPAFPVRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYG-ERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRSRKIPVAPVKALERLKIGTRSAVMVRAADVLEAGP


General information:
TITO was launched using:
RESULT:

Template: 1O9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 618 -61681 -99.81 -338.90
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -99.81
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_1O9G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O9G-query.scw
PDB file : Tito_Scwrl_1O9G.pdb: