Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MIHKHETRELVAIEE-------------------LVMSWIEAFKSLSYFGIFLALSI---------EFIPAEVVLPLAGYWVS--KGDMTLAGVVLAGSLGGV--AGP--------LTLYWIGRYG--GRPFLERFGKYLFIKPEALDK----------SDNFFKKH-------GGFVAFSGRFLPGIRTL------ISIPCGIAKMNVWVFSLYTFIA-------------MLPITFVYV--------YLGVKLGENWKAVGSILDQYMLPIGIAILALFLLYLLMKKRKKRTHSEQLSVFLK----NKR---------
4LK4 Chain:A ((32-372))RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVIIGAYDLNNSSQGERIAAQKIYRHLSYSPSNLLNDIAIVELAQTSSLPAITLAGPATRTSLPALTPLTVAGWGITFTPILQEVDVDLVSQSLCQIVMQHGISSDPNSTNFCAARLTQGDAGGPIVVKTGREQLGIVSWGDEQGTYGVYTNVSYFRDWITKHTNQLSYDQVANLGIRPLGKVSQSFTYTNLDANALTYTGNTFSSLPADFSVLSDGCSTKVTLATGESCSVEVAVDAQHYRQYQYDFELIFSYAGGSKRATSRIQLDT


General information:
TITO was launched using:
RESULT:

Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 996 -138144 -138.70 -625.08
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -138.70
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.133

(partial model without unconserved sides chains):
PDB file : Tito_4LK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LK4-query.scw
PDB file : Tito_Scwrl_4LK4.pdb: