Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTRKPFIICDFDGT-ITMND-NIINIMKTFAPP-------------EWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHE-IPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSN-QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK---LSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQNKNAGESSLK
2HCF Chain:A ((3-230))---SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHYFPFGAFADDALDRNELPHIALERARRMT----------GANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPG-----------TLFKNFAETDEVLASILT------


General information:
TITO was launched using:
RESULT:

Template: 2HCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 982 -104030 -105.94 -509.95
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -105.94
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_2HCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCF-query.scw
PDB file : Tito_Scwrl_2HCF.pdb: