Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPN-DFQLKEGQEFHLQ-SP-FGPSPCKVLAVQAPTELSFEWDTEGWVVTFQLEDLGEKTGFTLIHSGWKEPNEVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEE
3Q6A Chain:A ((2-125))----------DIITKMQVDVPRETVFEAFVDPEKIGGFWFSSSSERWEQGKTITLRYEEYDA-LNINIERVEDNQLIAFTWGA--HPITIQFEESEAGTVVTTTEKDFDTQDVK----------QLLGQKEGWVY-MLSCLKVYLEH


General information:
TITO was launched using:
RESULT:

Template: 3Q6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 495 2996 6.05 24.96
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 6.05
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_3Q6A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q6A-query.scw
PDB file : Tito_Scwrl_3Q6A.pdb: