Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLIILEGPDCCFKSTVAAKLSKELK---YPII--KGSSFEL---AKSG--N------E----KL-FE--H---FNK----LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIEDKIKAKAK-VVYLHADPSVIKKRLRVRGDEYIEGKDIDSILELYREVMSNAGLHTYSWDTGQWSSDEIAKDIIFLVE
1NN5 Chain:A ((9-198))GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAK--ENF-SLDWCKQP-DVGLPKPDLVLFLQLQLADAAKR-----ERYENGAFQERALRCFHQLMKDTTLNWKMVDASK-SIEAVHEDIRVLS-


General information:
TITO was launched using:
RESULT:

Template: 1NN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 656 -20628 -31.44 -133.94
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -31.44
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_1NN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NN5-query.scw
PDB file : Tito_Scwrl_1NN5.pdb: