Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNLKQIEFCLDKIGDMFPHAE---CEL--------VHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYKRPEDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGGEVPRDRDELVK-LPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKD----SVLEVEKTLMRKVPKEDWSVTHHRLIFFGRYHCKAQSPRCAECPLLSLCREGQKRDKKGLVKR
3N5N Chain:X ((13-242))----AEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYS-RGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQE-----


General information:
TITO was launched using:
RESULT:

Template: 3N5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 928 -15149 -16.32 -72.48
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain X : 0.73

3D Compatibility (PKB) : -16.32
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3N5N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N5N-query.scw
PDB file : Tito_Scwrl_3N5N.pdb: