Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLLMLTTGGTIASVEGEN-G-LAPGVKADELLSYVSKLDNDYTMETQSLMNIDSTNMQPEYWVEIAEAVKENY-DAYDGFVITHGTDTMAYTSAALSYMLQHAKKPIVITGSQIPITFQKTDAKKNITDAIRFACEGVGGVYVVFDG-------RVIQGTRAIKLRTKSYDAFESINYPYIAFINEDGIEYNKQVTEPE-NDTFTVDTSLCTDVCLLKLHPGLKPEMFDALKSM-YKGIVIESYGSGGVPFEGRDILSKVNELIESGIVVVITTQCLEEGEDMSIYEVGRRVNQDLIIRSRNMNTEAIVPKLMWALGQSSDLPVVKRIMETPIADDVVL
2D6F Chain:A ((90-426))LPDVSIISTGGTVASIIDYRTGAVHPAFTADDLLRANPELLDIANIRGRAVFNILSENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLR-TPVPVVFTGAQRSSDRPSSDASLNIQCSVRAATSEIAEVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIKILEENYRKRGSDELELSDRVEERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLGHCPDT---LIPVIGEAHDMGVPVAMTSQCLNGRVNMNVYSTGRRLLQAGVIPCDDMLPEVAYVKMCWVLGQTDDPEMAREMMRENIAGEINE


General information:
TITO was launched using:
RESULT:

Template: 2D6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2017 -9419 -4.67 -28.98
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -4.67
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_2D6F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D6F-query.scw
PDB file : Tito_Scwrl_2D6F.pdb: