Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAI-LADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKE-AKRLIGGLSLQKDLLYELCDLIAARDH
4F62 Chain:B ((18-292))-------------QYLEQQLSDYAPA----NQLHNAMRYSLF-GGKRIRPMLTYASAQLVGDISSLTDASAAALESIHAYSLIHDDLPAM---------------FDEATAILAGDALQTFAFELLSNPTSAQ--PELAIKLIQELVVASGRNGMITGQMIDLSSE--NISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDL------------------KATYPKLLGLDGAK-ALVVRLHEQAIAQISEFGDKSQPLTDLANYIID---


General information:
TITO was launched using:
RESULT:

Template: 4F62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1094 -62644 -57.26 -264.32
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -57.26
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4F62.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F62-query.scw
PDB file : Tito_Scwrl_4F62.pdb: