Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQKKTEHHNQ
2F5D Chain:A ((3-136))--TPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIY----GLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQKK------


General information:
TITO was launched using:
RESULT:

Template: 2F5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 409 -74963 -183.28 -576.64
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.98

3D Compatibility (PKB) : -183.28
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_2F5D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F5D-query.scw
PDB file : Tito_Scwrl_2F5D.pdb: