Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNEPVKRGKKNRWELNLPIMTYVVADDWIDKLGRETFTLWLRFHTWVDREDELRDYDRIPRSFENIYKKTLGISKSKFYRLIKPLWEYGLIDIIEYEESNRNSTKPKNIIVYEYPLHEIERKYKPLEKLRDWDKDYNSVSKELGKTGGRPRKKDSEEEPEKKPEEVTKKKRKYKLKRVIHNGFKNETVEGFKNETVEGFKNETVTVSKIKPNNYSNIFNNLSNISTNVSNNLLIDDDEEIENEPTGRTINRSLLFSQEDIKQAYQFINRFSVIQLRENFSFDKHFEERLVCYLWKAGISTFYTHEISKMIKKIADYEKSKKGRLNPIRDRALYMVNGLVMNRASSQSEHATYKLNQYKKQKEQEKQQQEQQRSRVPFYNWLEEREEQTEGQLPTT
2P03 Chain:A ((1-323))YSREKNQPKPSPKRESGEEF-----------------------------------RMEKLNQLWEKAQRLHL--PPVRLAELHADLKIQERDELAWKKLKLDGLDEDG-------------------EKEARLIRNLNVILAKYGLDGKKDARQVTSNSLSGTQEDGLDDPRLEKLWHKAKTSGK------FSGEELDKLWRE-FLHHKEKVHEYNVLLETLSRTEEIHENVISPSDLSDIKGSV-LHSRHTELKEKLRSINQGLDRLRRVSH----QGYSTEAEFEEPRVIDLWDLAQSANLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLRHAESVGDGERVSRSREKHALLEGRTKELGYTVKKHLQDLSGRISRARHNEL-----


General information:
TITO was launched using:
RESULT:

Template: 2P03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 747 -1970 -2.64 -6.10
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -2.64
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_2P03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P03-query.scw
PDB file : Tito_Scwrl_2P03.pdb: