Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRIKNKQFAVIGLGRFGGSICKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLSDEYSIVELLATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFENEGM
2HMS Chain:D ((7-140))------KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDEN----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 635 -113527 -178.78 -847.22
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain D : 0.81

3D Compatibility (PKB) : -178.78
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_2HMS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HMS-query.scw
PDB file : Tito_Scwrl_2HMS.pdb: