Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------------------------------------------MIPIPSAIDGQSFLLQELEQVMKPLGYVINGGWEYD---HGYFDYKIDDRDGYLFLRIPVNAVQGSLDERGAAVRIGTPFMLRQVFQADVDDHAEGGPF--QSLFNQFSE-----PERRDAEIDPAFLDIGASLVKELEDVLLH-----------------------------------------------------------------------------------
2W0C Chain:L ((1-335))MIVKKKLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLRTIVRQGVSIKGMNYTSVMLHTEYAQEIEYWVGDLDYSFQEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDG---------------GRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPF-----FDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGD---ETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT


General information:
TITO was launched using:
RESULT:

Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 345 6048 17.53 54.48
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain L : 0.56

3D Compatibility (PKB) : 17.53
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.56
QMean score : -0.054

(partial model without unconserved sides chains):
PDB file : Tito_2W0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W0C-query.scw
PDB file : Tito_Scwrl_2W0C.pdb: