Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQSIKLFSVLSDQFQNNPYAYFSQLREEDPVHYEES---IDSYFISRYHDVRYILQHPDIFTTKSLV--ERAEPVMRGPVLAQMHGKEHSAKRRIVVRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGAAFAKNEIEIVANIVLDKMRNIRLEED--FCYAESGLYTRGPVSLLVAFDGA
4E2P Chain:A ((21-417))---------MTTPAERWGIHPEHFWLYGRRPRQMVEFDEKMNAWNVYGYAEAIEVLGDPGTFSSHMSRLL------FTEGDLLQTDPPDHRELRKLVSHAFTPKVVAELEPRITALTQELLDAVADRDTFDLMTALAYPLPVTVVAELLSIPSADRHLFEGWMTEIVHS--------------MAPMRKMLEYLREHAAECRRRPRGDLMGKLIEAEVDGRRLTDNHIVNFAKMLLIAGYLTTTMLIGNTVLCLDSYPEQAARVRADRSLIPGLLEESMRFLSPVAATYRATTRDVEVAGQRLSADQMVMVWFGAANRDARQFAEPELFDMTRGP----------NPHLGFGRGIHFCLGGPLARMEGRVALDHLLDRF-PELYTDPERPPTFMPGFDTTGVSSLPLRTS--


General information:
TITO was launched using:
RESULT:

Template: 4E2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1797 -32303 -17.98 -88.99
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -17.98
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_4E2P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E2P-query.scw
PDB file : Tito_Scwrl_4E2P.pdb: