Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIHPDSINTCAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV
3GOC Chain:A ((7-229))-----PAGW-PATEEEARAVQDELRGRVILDEPGPPPGTGRVTGVDVAYDDER--DVVVAAAVVLDAATLDVVAEATAVGEVSFPYVPGLLAFREIPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKNPFTFSYEDP---GAPRGSAAPLLAGADEVGRALRTQSGVKPVFVSVGHRVDLDHACAHTLALT-PKYRIPETTRRADSLCRRALKEATA---


General information:
TITO was launched using:
RESULT:

Template: 3GOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1338 -149209 -111.52 -669.10
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -111.52
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3GOC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GOC-query.scw
PDB file : Tito_Scwrl_3GOC.pdb: