Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFKLVDLNVERVDKEEQSIEQFPLIDGLIINKEDGENHWLIEALVQKEHLSFFEQLQNSQSEAKVFVTITKKSNRPAQLTAAVKNIVKLEESIQVLLYGQMVTRKQQGTETILESLVKEGYTGTK-LIEAFKQKL
1PU1 Chain:A ((1-91))MSLRKL-----TEGDLDEISSFLHNTISDFILKRVSAKE-------IVDIDITVLVEYTDE-----------------------------LKVDISAELYLDELSDADPG---IVDEAVDAAYRSLESFLDGFRE--


General information:
TITO was launched using:
RESULT:

Template: 1PU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 280 -29864 -106.66 -331.82
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -106.66
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_1PU1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PU1-query.scw
PDB file : Tito_Scwrl_1PU1.pdb: