Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEETCGGNPIKTAKELQ--KDNITVNVIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
4FX5 Chain:A ((76-256))--------------------------------SENVEVIIIDCSGSMDYP---RTKMMAAKEATKVAIDTLTDGAFFAVVAGTEGARVV-------YPTGGQLLRADYQSRAAAKEAVGRLHANGGTAMGRWLAQAGRIFDTA-PSAIKHAILLTDGKDESE-TPADLARAIQSSIGNFTADCRGIGEDW-EPKELRKIADALLGTVGIIRDPATLAEDFREMTAK---


General information:
TITO was launched using:
RESULT:

Template: 4FX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 980 -25456 -25.98 -142.21
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -25.98
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_4FX5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FX5-query.scw
PDB file : Tito_Scwrl_4FX5.pdb: