Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYA----ISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCG-SPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
4UXJ Chain:B ((12-182))-------GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYS-----------SHDQLMLRAQAAVSQLTEVRDTWKRF----DVLAIDEGQFF-SDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQE------LIGGADMYIATCR-----------


General information:
TITO was launched using:
RESULT:

Template: 4UXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 743 -20180 -27.16 -130.19
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -27.16
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_4UXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UXJ-query.scw
PDB file : Tito_Scwrl_4UXJ.pdb: