Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLANIIDHTALKPHTQKADILKLIEEAKTY--KFASVCVNPTWVELAAKELKGT---GVDVCTVIGFPLGANTTETKAFETKDAISKGATEVDMVINIAALKDKEDDVVEADIRGVVEAVAGKALVKVIIETCLLTDEEKER-ACRLAVSAGADFVKTSTGFSTGGATKEDIALMR---KTVGPDIGVKASGGVRTKEDVDTMVEAGASRIGASAGVSIVKGENASGGDNY
5C5Y Chain:B ((13-208))----SLMDLTSLTNTETDQEIIDLCRQAKSPAGETAAICIFPRFIPVAKKALKAQQTPHIKIATVTNFPQGNDDLDIALAETRAAVAYGADEVDLVFPYRALIQGNETIGFDMVKVCKQACSGNAKLKVIIETGELKSEELIRKASEIAINAGADFIKTSTGKVAINATPEAAKVMLTVIKNKNTAVGFKPAGGVRNADD--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1027 24093 23.46 128.84
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : 23.46
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_5C5Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C5Y-query.scw
PDB file : Tito_Scwrl_5C5Y.pdb: