Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAG---ASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVF----------------------------HTNVGVLQGLPD-PFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWL-TCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
3UOW Chain:A ((9-274))
-KILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKD-I--KDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCRNFSSAMDLYSNYKLMN--CCLFENIKSDITTVWMNHNDEVT--KIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKK-FDPIRYHELELK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3UOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138729 for 1656 contacts (-83.8/contact) +
2D Compatibility (PS) -21360 + (NN) -8823 + (LL) 1068
1D Compatibility (HY) -12800 + (ID) 2100
Total energy: -182744.0 ( -110.35 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3UOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UOW-query.scw
PDB file :
Tito_Scwrl_3UOW.pdb
: