Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNLYYPAPPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKD---IREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPARGAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALVPGVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPPQAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFTATPLPLALAKLFWTARFNTSQPCEGQTF |
2OPE Chain:A ((28-147)) | ----------------------------------------------------------------------FEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLERFVSG-------YKMNPKIAEKYNVSVHFVNKEKPRAYS--LVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5277 for 857 contacts (-6.2/contact) +
2D Compatibility (PS) -12716 + (NN) -6221 + (LL) 13484
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -13480.0 ( -15.73 by residue)
QMean score : 0.442
|
|
|