Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRAS-RAGKVLDQREAILVTVA-GGRITRLSEFYADPAATESFWA
5AIG Chain:A ((2-123))
----TPIETVTAFIAHWNSGDMEAMYDLCAEDVVWHNIPME----PIAGKPAMRAAVEGFMANVS-QCDWQVHAIAANG-ATVLTERTDGFTFTNGRRATIRVMGTFECDAERRIIAWRDYFDMLEFQREFA-
General information:
TITO was launched using:
RESULT:
Template:
5AIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78766 for 845 contacts (-93.2/contact) +
2D Compatibility (PS) -13169 + (NN) -4600 + (LL) 296
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -100689.0 ( -119.16 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_5AIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AIG-query.scw
PDB file :
Tito_Scwrl_5AIG.pdb
: