Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRIVLEPSADHPITIEPTNR---RVQVRVNGEVVADTAAALCLQEASYPA-VQYIPLADVVQDRLIRTETS-----TYCPFKGEASYYSVTTDAG-DIVDDVMWTYENPYPAVAAIA-GHVACYPDKAEISIFPG-
2R2C Chain:A ((36-180))
KSYKTWDVPIAKINIFAVAEYTDTQKIKVTVKGKILEGNTLP--------KSMVQVYLLED--KNHVLRGAVNGIWGEEFVNLKDYLYTYAVEPLSGMSFV-------AENYSIVAFVYDVQTFEVYDVVHVKINPQS
General information:
TITO was launched using:
RESULT:
Template:
2R2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12273 for 712 contacts (-17.2/contact) +
2D Compatibility (PS) -10893 + (NN) 4439 + (LL) 1772
1D Compatibility (HY) 800 + (ID) 600
Total energy: -16755.0 ( -23.53 by residue)
QMean score : 0.007
(partial model without unconserved sides chains):
PDB file :
Tito_2R2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R2C-query.scw
PDB file :
Tito_Scwrl_2R2C.pdb
: