Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVTRTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVS-ADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
4R9K Chain:A ((19-148))
--KASTPDEKIVLEFMDALTS-NDAAKLIKYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFKVMSIDAVEVFHIGSSKGLVFTERVDVLRALPTGKSYNLSILGVFQLTDGKITGWRDYFDLREFEEAVDLPLR-----
General information:
TITO was launched using:
RESULT:
Template:
4R9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64239 for 952 contacts (-67.5/contact) +
2D Compatibility (PS) -14095 + (NN) -6177 + (LL) -16
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -92277.0 ( -96.93 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4R9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R9K-query.scw
PDB file :
Tito_Scwrl_4R9K.pdb
: