Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTHDDTWDIKTSVGATAV-MVAAARAVETDRPDPLIRDPYARLLVTNAGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFASAVA-AGIRQVVILASGLDSRAYRLDWPAGTIVYEIDQPKVLSYKSTT----LAENGVTPSAGRREVPADLRQDWPAALRDAGFDPTARTAWLAEGLLMYL-----PAEAQDRLFTQVGAVSVAGSRIAAETAPVHGEERRAEMRARFKKVADVLGIEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVEGVPMADDPTAFAEFVTAERL------- |
| 3G8Q Chain:A ((1-278)) | ---------MKVSLAGQTVDVKKILNEIPK-------RTVTAALLE---GGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPC-------LYCARELAEAGVAGVVYLGRGRGLGPYYLAR-SGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPE---NLSGRVEIMVTRGDPDEAVELLKEEL-------PVFRIRRFLISGEFDRDELRERILEDIEPR-ILDPFAVRARIARAGAFSS---------SREAEVFIGDVLTSVGR---EVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85277 for 2057 contacts (-41.5/contact) +
2D Compatibility (PS) -28028 + (NN) -4591 + (LL) 2232
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -127764.0 ( -62.11 by residue)
QMean score : 0.198
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