Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATA-------------SRLVARLGPEAVRIIADTFAQLVTGQMRE--TRGTSE-NVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
| 3KRP Chain:D ((33-265)) | -----------------------------------------ESMRYSLL----AGGKRVRPMLCIAACELVGGDESTAMPAACAV-EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEG---LVAGQVVDVCSEGMAEVGLDHLEF---IHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGK-----------TYPKLIGVEKSKEFADRLN-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32138 for 1619 contacts (-19.9/contact) +
2D Compatibility (PS) -21271 + (NN) -7177 + (LL) 10428
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -72208.0 ( -44.60 by residue)
QMean score : 0.347
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